Tough spot since you are stranded.
As far as gettng a non honda rebuild - there are some mentioned here that seem to be better than Honda - Jasper and Gator are 2 that come to mind. Unfortunately you aren't in a position to go that route. How far are you from home. If the warranties are the same (and it isn't terribly far to get to the independent shop) I would go the cheaper option. If you get the Honda tranny you can get warranty work at any dealer. But is that worth an extra $1K?
FWIW, our 2nd tranny in our '01 from Honda (rebuild) lasted about 60K.
As far as gettng a non honda rebuild - there are some mentioned here that seem to be better than Honda - Jasper and Gator are 2 that come to mind. Unfortunately you aren't in a position to go that route. How far are you from home. If the warranties are the same (and it isn't terribly far to get to the independent shop) I would go the cheaper option. If you get the Honda tranny you can get warranty work at any dealer. But is that worth an extra $1K?
FWIW, our 2nd tranny in our '01 from Honda (rebuild) lasted about 60K.